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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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ContScout: sensitive detection and removal of contamination from annotated genomes
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COVID-19 pandemic reveals the peril of ignoring metadata standards
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine … The Science Within the archaeal domain, there is a group of tiny hitchhikers. These organisms are abundant and yet …
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Rice SNP-seek database update: new SNPs, indels, and queries
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Picking Up Threads of Cotton Genomics
Analysis reveals cotton genome stability across global … around the world whose livelihoods depend on cotton production, and the crop’s annual economic impact of $500 … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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Distinct and rich assemblages of giant viruses in Arctic and Antarctic lakes
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Modular cell-free expression plasmids to accelerate biological design in cells
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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … The Impact The Antarctic lakes are a “treasure trove” of unknown microbes that play critical roles in environmental processes (related to interactions of soil-sediment …
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Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566T
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or … host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … act as friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They …
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