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Expanding Virophage Diversity
… Virophages are small viruses with double-stranded DNA genomes that … 10.9-42.3 Kb. Additionally, the gene counts have similarly gone up from 13-25 to 12-39. “Overall,” the team concluded, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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A Powerful Technique to Study Microbes, Now Easier
… Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in …
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Evolution of a Fungal Gene Expression Regulator
… Describing the largest analysis to date of the modified DNA base 5mC variations in … considered for bioenergy feedstock development. Summary With the aim of producing at least one reference genome for … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of …
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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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Metabolic Potential for Reductive Acetogenesis and a Novel Energy-Converting [NiFe] Hydrogenase in Bathyarchaeia From Termite Guts – A Genome-Centric Analysis
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‘Candidatus Adiutrix intracellularis’, an endosymbiont of termite gut flagellates, is the first representative of a deep‐branching clade of Deltaproteobacteria and a putative homoacetogen
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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FICUS-NERSC/KBASE
… Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most … The researcher then submits a proposal for consideration in the next … order by the reviewers. The ranked proposal list, along with a recommendation from management at JGI and the other …
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that … Beyond providing a scalable solution for production of high-quality fungal … into undergraduate teaching laboratories with minimal overhead (cost of media, ITS sequencing and …
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Thawing permafrost, microbes, and viruses: Gary Trubl — Part 1
… Gary Trubl, a virologist at Lawrence Livermore National Laboratory, wants to understand …
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How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was recently …
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Comparative genomic analysis of the gut bacterium Bifidobacterium longum reveals loci susceptible to deletion during pure culture growth
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