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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … States. They also provided multiple access points to the information. The team harnessed a community-science program to …
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Identifying genomic data use with the Data Citation Explorer
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … metagenomes (within IMG).  The Impact The initial analysis highlights abundances of gene annotations that provide … Neighbor (KNN) Classification. LDA is a supervised data compression technique that was used to take the …
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Genome sequence of the Lebeckia ambigua-nodulating “Burkholderia sprentiae” strain WSM5005T
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Homepage
…   Gain access to omics technologies generating community data at zero cost —  submit a proposal.  … Our homepage video includes external footage from: University of Delaware; … All the sampling activities in Antarctica have been performed in the frame of italian expeditions of the Italian …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… funded by the National Science Foundation (NSF) that supports underrepresented minorities in science, technology, … early stages, so I can begin biological analysis of the data sooner than I anticipated.” In her message, Dumont … the event and shared updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant …
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Complete Genome Sequence of the Plant Growth-Promoting Endophyte Burkholderia phytofirmans Strain PsJN
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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Examining the cause of high inbreeding depression: analysis of whole‐genome sequence data in 28 selfed progeny of Eucalyptus grandis
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … gene loss shape the BGC repertoire in most genomes. The BGC data will also soon be contained within the JGI’s Secondary … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Informatics Advisory Committee
… The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. … effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    …
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