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Sequencing Submission Requirements for DNA Synthesis
… options include SnapGene . … How To Use ApE To save your ApE file as a Genbank file, simply go to File -> Save … the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Fungal & Algal Program
… functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth promoters, or pathogens) and as the most … … Genomic Encyclopedia of Fungi focuses on aspects of plant feedstock health, biorefinery mechanisms and fungal …
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Uncovering Novel Genomes from Earth’s Microbiomes
Biotechnology . Known as the GEM (Genomes from Earth’s Microbiomes) catalog, this work results from a collaboration … scientists, researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence …
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Gallionellaceae in rice root plaque: metabolic roles in iron oxidation, nutrient cycling, and plant interactions.
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Plant compartment and biogeography affect microbiome composition in cultivated and native Agave species
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing … But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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River microbiomes from around the world: Kelly Wrighton
Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Ray Turner Completes Last Tour of Lab Duty at JGI
… to his successor, Nick Everson, there was a knock at the door of Ray’s home office (garage). There, standing at a … lucky enough to have worked with you over the years. During your career, I witnessed you design and model what great … basis.” In retirement Ray hopes to spend quality time with friends and family, golfing, traveling a bit, and riding his …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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Better Crops With a Pointillist Approach to Plant Genomics
In this episode, we peer into plant cells. Researchers are using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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