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IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses

DNABERT-S: pioneering species differentiation with species-aware DNA embeddings

Experimental factors affecting PCR-based estimates of microbial species richness and evenness

acdc – Automated Contamination Detection and Confidence estimation for single-cell genome data

Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios

A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles

DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes

Methodology for Extracting High-Molecular-Weight DNA from Field Collections of Macrofungi

Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs

JGI@25: Cow Rumen and the Early Days of Metagenomics

… In honor of the JGI's 25th anniversary in 2022, we have … that are still vital to facilitate the assembly of small DNA fragments into larger and coherent pieces called contigs … days and that are widely used by many, many scientists.” Using samples of rumen-digested switchgrass, researchers …

Natural Prodcast Episode 4: Nancy Keller

… DAN: You’re listening to the US Department of Energy Joint … we discussed in the primer podcasts ( part 1 here , part 2 here , and part 3 here ), which you should be able to find … to begin with. So transformation, or manipulation of the DNA of genes and bacteria, occurred much faster earlier than …

Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.