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Plant Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental … and are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … from sequence databases into biotechnological or environmental applications.  We are interested in:  …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea … by studying the microbial communities in Antarctic lakes, some of which have salinities 10 times that of … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory (EMSL) , …
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Biodiversity of Magnetotactic Bacteria in the Freshwater Lake Beloe Bordukovskoe, Russia
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Distinct and rich assemblages of giant viruses in Arctic and Antarctic lakes
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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Partnerships: Myco-Ed
… Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … ~50 lineages selected for sequencing 16 genomes released 20 members from 15 institutions 300+ students 800+ … Beyond providing a scalable solution for production of high-quality fungal reference genomes, this program is an …
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Biotech Partners Summer Intern Co-Authors NAR Paper
… Kaushal Sharma, one of five Antioch High School rising juniors who participated in internships at the DOE Joint … program is now an author on a Nucleic Acids Research publication. The paper describes the version 6 data updates …
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Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry
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Into the darkness: the ecologies of novel ‘microbial dark matter’ phyla in an Antarctic lake
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