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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy soils – are at the heart of sustaining food and bioenergy security for a steadily … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial … The perennial grass switchgrass ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex genome with …
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Evidence for the widespread distribution of CRISPR-Cas system in the Phylum Cyanobacteria
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Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … size and structure varied enormously, ranging from just 12 kilobases in Rozella allomycis , an early-diverging … search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over 26,000 …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … than two copies of the genome , which can have pronounced ecological and evolutionary consequences. A previous study conducted by our research team surveying the genomic and phenotypic diversity across the natural range of …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a … to their lab in Mulford Hall. There, they conducted DNA analyses of samples collected on recent SOD Blitz …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … Science Programs and draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI …
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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … replicating a whole community is impossible.  Metagenomic sequencing allows researchers to study the entire …
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Toward a Standards-Compliant Genomic and Metagenomic Publication Record
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … are among the major high-yield C4 crops, as are the candidate biofuel feedstocks Miscanthus and switchgrass.  … green millet plant genomes were generated, though the final analyses focused on 598 individuals. Schmutz and his team …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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