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Natural Prodcast Episode 15: Katherine Duncan
So then you have this chemical profile. And this is a game based on all those limitations. That’s what you’ve got in … it into pieces. And then you’re comparing those metabolites based on the pieces they break into. So not only do you get … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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Plant-Microbial Interactions Group
… including single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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SPRUCE-ing Up Science
… researcher at the Oak Ridge National Laboratory (ORNL), based in Oak Ridge, Tennessee. Recently, Lawrence, in … of peat moss. Peat is found in the temperate north, in U.S.-based places like Minnesota for example, despite taking up … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Krishna Palaniappan
Krishna is responsible for the design and maintenance of the Integrated Microbial Genomes …
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Marine Microbe Contains Multitudes
… is a suite of fast, multithreaded bioinformatics tools designed for analysis of DNA and RNA sequence data.  … …
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FICUS-NERSC/KBASE
… more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … sequences from the “contaminated” genome data with strong confidence. Taking a conservative approach, we were able to … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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The JGI Data Portal: Improving User Experience
… so our joint team started small, in the tradition of agile design and development,” said Linda Setchell, a Truss … product manager who is part of the joint JGI/Truss team. Based on Google Analytics data, the team noticed that a … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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A Plant Root Atlas for Tracking Developmental Trajectories
… with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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Frequently Asked Questions: Proposal Submission
… instructions.  Many of the submissions are done using web-based forms.   To view the proposal templates, go to the … proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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