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… large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … high quality reference genome sequence of green millet ( Setaria viridis ). The team of researchers at the Danforth Plant …

… kingdom, they are well-suited to train machine learning models that predict biological traits from DNA sequences. … species and studying diversity in complex biological systems. By making the tools and data available through … due to features like self-splicing introns and multiple genetic codes. Adding to the challenge, mitochondrial …

… the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: … shows the pyramidalization of phosphines and predictive models that allow you to choose the right phosphine ligand …

… discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  now available to the global research community able … of achieving a predictive understanding of biological systems. “If we could model the genome as if it were a …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … quantity and quality has been the rate-limiting step for many projects at the JGI. The quality of the starting … sequencing workflows and provide guidance as to how to perform sample QC prior to shipment: Importance of Sample QC …

… the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … Berkeley National Laboratory (Berkeley Lab), and the DOE Systems Biology Knowledgebase (KBase). They also built an … bioproducts. Summary Researchers at the University of California, Davis and UC Santa Barbara generated a list of …

… the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …