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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …
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Metabolic engineering for valorization of macroalgae biomass
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six … of members. Each of the researchers had their own reasons for wishing to serve on the UEC. For microbial ecologist …
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Metabolic Modeling of Fungi
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Sequencing crop genomes: approaches and applications
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Products
The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library … to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of … ( IMG/M ) portal. As part of a comparative analysis, 824 new GEBA-Actino genome sequences were combined with nearly … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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David Goodstein
… genome evolution revealed by pan-genomic analysis of Brachypodium hybridum and its diploid progenitors. Nature … 2017.  Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure. … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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New Research Sheds Light on Diversity in the Deep Sea
Microbial communities living near hydrothermal deep-sea vents hold vast potential for bioenergy.   The Science Hydrothermal vents are … microbial communities could lead to the development of new biotechnologies around clean energy,  biofuels and …
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JGI announces second round of 2023 New Investigator awardees
From left to right: [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin … circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE missions and … not led any previously-accepted proposals — through the New Investigator call under our Community Science Program .  …
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Natural Prodcast Episode 20: Brian Bachmann
… … DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First and foremost, our interview this week is with Professor Brian …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE … Genome Institute has continued its journey to realize our new vision to, “ Lead genomic innovation for a sustainable … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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