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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … is only available for a fraction of extant actinobacterial diversity. The article adds to the compendium … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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Ten Years of Maintaining and Expanding a Microbial Genome and Metagenome Analysis System
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IMG ER: a system for microbial genome annotation expert review and curation
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RegPredict: an integrated system for regulon inference in prokaryotes by comparative genomics approach
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Chordate evolution and the three-phylum system
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … expanding the known diversity of bacteria and archaea by 44%, is now available and  described November 9, 2020 in  … secondary metabolite biosynthetic gene clusters (BGCs), increasing these BGCs in IMG/ABC (Atlas of Biosynthetic Gene …
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Bacterial Genome Annotation
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Jane Grimwood Named HudsonAlpha Genomics Chair
… City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … improvements to switchgrass through more targeted genome editing techniques. A 2020 Nature Biotechnology paper on the …
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Legacy Effects of Cropping System and Precipitation Influence the Core Camelina sativa Microbiome
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Gene and transcript abundances of bacterial type III secretion systems from the rumen microbiome are correlated with methane yield in sheep
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… The disease is known more commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, … trace its origins, the researchers engaged the DOE Joint Genome Institute (JGI), with support of the US Department of … was released to the public in a highly-cited 2006 publication in the journal Science . This provided a …
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