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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Hidden diversity in the oomycete genus Olpidiopsis is a potential hazard to red algal cultivation and conservation worldwide
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Genome analysis reveals diverse novel psychrotolerant Mucilaginibacter species in Arctic tundra soils
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Better Genome Editing for Bioenergy
… A team has optimized a crucial part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … This work was supported by DOE Joint Genome Institute grant  CSP-503076 (IW, HA, and MB) and NSF  1706545 (IW). HA …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea … This work was supported by the Australian Research Council (DP150100244) and the Australian … (project 4031). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Divergence among Genes Encoding the Elongation Factor Tu of Yersinia Species▿
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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CSP Large Scale Call
… science projects that address biological functions for biomanufacturing, critical minerals and materials, … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … accepted proposals, sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the …
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Game On: High School Students Drive Everglades Metagenomics Study
… In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in Florida to discuss … Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to sift through over 55 billion … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in … for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center … a very high quality reference S. viridis genome sequence. Analysis of these plant genome sequences also led …
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Red seaweed supplementation suppresses methanogenesis in the rumen, revealing potentially advantageous traits among hydrogenotrophic bacteria
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Micro-Scale Applications Group
… Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link …
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