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A deep dive into microbial genomics reveals one bacterial … cells of the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the … of fast, multithreaded bioinformatics tools designed for analysis of DNA and RNA sequence data.  … Datasets … BBTools …

Metagenomic datasets could help map out microbial diversity hotspots … All of the data are publicly available in the National Center for Biotechnology Information (NCBI) GenBank … Microbial Genomes & Microbiomes (IMG/M) database. In their analysis, the team found that bacterial isolate genomes …

As SIP experiments shed more light on microbial communities … — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the … a  few years ago, researchers can request quantitative SIP analysis as a capability in proposal calls to the U.S. …

Developed in 2017, the PDT was established in part to help better-connect industry to … high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. …

Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the … efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …

… … DAN: You’re listening to the US Department of Energy Joint … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify …

In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused … the JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, DNA … technical JGI directions for DOE User science. … Complete Publications Genomic Technologies Program Defining the vast …

The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The … effective management and strategic objectives for the JGI’s data science, informatics and information technology (IT) …

Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … (ANR), US Department of Agriculture P­­lant Gene Expression Center, Pacific Northwest National Laboratory, and the U.S. … 400 root and leaf samples and helped analyze the sequencing datasets. The results from the first year showed that 10,727 …