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A Complex Confection Decoded: Sugarcane Reference Genome
… was the last major crop without a reference quality genome and now crop researchers can work toward advancing … the location of genes that provide resistance to the brown rust disease that can devastate a crop. The Impact In … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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The Physcomitrella patens gene atlas project: large‐scale RNA‐seq based expression data
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Antisense Down-Regulation of 4CL Expression Alters Lignification, Tree Growth, and Saccharification Potential of Field-Grown Poplar    
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JGI & KBase at PAG XXVII
The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … Bioinformatic Approach to Discovering Promoters Regulating Poplar Drought Response 7:27 PM Highlights from Genome of Miscanthus 7:45 PM Transcriptome Changes during Leaf Senescence in  Populus 8:03 PM Natural Diversity in  …
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JGI@25: Studying Sorghum’s Survival Skills
… can photosynthesize and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a … climate has earned it a place on the JGI’s Flagship Plant Genome roster. Sorghum has an important feature in common … strengths into other plants. A brief timeline of sorghum projects at the JGI: 2009: JGI and collaborators use …
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A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy.
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Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers.
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Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem
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User Programs
Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Eurasia. The team also identified a gene associated with leaf angle, which determines how much sunlight leaves can … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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