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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …
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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Evidence of Asexual Overwintering of Melampsora paradoxa and Mapping of Stem Rust Host Resistance in Salix
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Microbiome Data Science Team
Biology is currently experiencing a revolution brought on by rapid developments in … 2014), unearthing hundreds of thousands of new viral genomes and their predicted hosts (Nature 2016, Science … of genomes from uncultivated microbes (Nature 2019). Other projects in the group include the sequencing and comparative …
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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The Surprising Structure of a Shrub Willow Sex Chromosome
… willow and its close relative  Populus trichocarpa,  or the poplar tree, are potential biofuel feedstocks of interest to … Laboratory and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … (2017YFC0505203, 2016YFD0600101), and the National Key Project for Basic Research (2012CB114504). The work …
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Fungus Fuels Tree Growth
… start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science The … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular‐mycorrhizal symbiosis in Brachypodium distachyon
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Eurasia. The team also identified a gene associated with leaf angle, which determines how much sunlight leaves can … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …
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Rewiring metabolism of Clostridium thermocellum for consolidated bioprocessing of lignocellulosic biomass poplar to produce short-chain esters
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Multiplex Editing of the Nucleoredoxin1 Tandem Array in Poplar: From Small Indels to Translocations and Complex Inversions
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to … data on scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and …
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