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… Tamyra Long and Zyiah Mikes worked with mentors Yi Zhai and John Vogel from the Plant Functional Genomics Group to study the effects of  Brachypodium distachyon plant root exudates on the plant … lab. We've been focused on analyzing plant microbiome data using different programming languages such as Python, Bash, …

… “citizen science” project to generate real-time data for modeling and predicting the spread of a plant disease, … 1;313(5791):1261-6. doi: 10.1126/science.1128796 Science News of the Day: Stokstad E. Genetics. Genomes highlight … Release: JGI, VBI Describe Evolutionary Origin, Disease-Causing Mechanisms of Sudden Oak Death, Related Soybean …

… leadership roles within large DOE-funded research programs using mass spectrometry for energy and environmental … to JGI users.  Dr. Northen’s research is focused on using metabolomics to link genomes with environments to … application of advanced mass spectrometry approaches and model laboratory ecosystems (EcoFABs). …

… annotated several Phytophthora genomes; this depends on the scientific questions asked and whether they are within DOE … search for genes/proteins by their commonly used names in publications? e.g. erg-1 (instead of the Gene ID etc., which … of the portal. 14.  Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: …

… with the DOE mandate to provide data access widely to the scientific community as soon as possible after data … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …

… in eight states spread across 1,100 miles. Switchgrass is a perennial grass that quickly grows in a variety of soils and … reference sequence of the complex switchgrass  genome using samples collected at these gardens. Building off this … copies across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with …