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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior … switchgrass transformation pipeline and, in collaboration with industrial partners, generated hundreds of transgenic … tolerance, and the mechanisms by which plants interact with their microbiomes. In addition, his group conducts …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… on microbial communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine … to do it but just otherwise couldn't or wouldn't,” said Rex Malmstrom, leader of the Microscale Applications group at … results from different SIP studies easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head …
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Plant Program
… With collaborative user projects, the JGI’s Plant Program … role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to environmental changes. … of natural compounds that support disease resistance, with applications in sustainable agriculture, including the …
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JGI announces 2024 New Investigator portfolio
… The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each year we look for novel research projects — aligned with DOE missions and from PIs who have not led any …
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JGI Portals
… a new login service, requiring the use of an ORCID account with two-factor authentication enabled to log in. Check our … IMG/PR is a plasmid genome resource featuring the largest collection of plasmids automatically identified from genomes, metagenomes, … over 15 million viral genomes and fragments, enriched with functional annotation, taxonomic classification, and …
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Crysten Blaby-Haas
… Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics … to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH Ruth L. Kirschstein … aminopeptidase. Cell Reps 39 (7), 110834. (Subject of News and Views Article in Nature 608, 38-39 (2022) and …
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UC Merced Interns Reflect on Their JGI Summer Projects
… this past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to … as well as build their network in the field of genomics and scientific research. The topics students worked on ranged … summer. The JGI-UC Merced internship program was founded in 2014 with the goal of inspiring students to embark on a …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … range of new tools and capabilities to support their scientific investigations of biological and environmental … new plan goes beyond outlining a broad vision and multiple scientific, technological, and operational themes and …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … Lung, and Blood Institute in August 2018 Travis Lawrence (2014 graduate intern): Accepted a post-doctoral position …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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The Biota Project: A Case Study of a Multimedia, Grassroots Approach to Scientific Communication for Engaging Diverse Audiences.
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