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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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New voyages to explore the natural product galaxy
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… suggests, there is metal in the hills, and it has legacy mining that goes back more than 100 years. And in particular, there’s an inflow from the … See you next time. … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … environments such as poor soils and drought. The reference genome for M. sinensis, and the associated genomic tools, …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, …
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JGI@25: From Life at the Extremes to Editing Genomes
JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes … is a pioneer in metagenomic studies, recovering microbial genomes from biofilm samples at the Richmond Mine in Iron … Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV et al. A Functional …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
So a few years ago, when they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome …
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NeLLi — Symposium on New Lineages of Life
The DOE Joint Genome Institute hosted the hybrid “NeLLi 2023 Symposium” … Roland Hatzenpichler , Montana State University   Joint Genome Institute Organizers: Frederik Schulz,  New Lineages … University of Delaware Eunsoo Kim, American Museum of Natural History Roland Hatzenpichler, Montana State …
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Genome-reconstruction for eukaryotes from complex natural microbial communities
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Widespread natural variation of DNA methylation within angiosperms
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Pathway and Gene Discovery from Natural Hosts and Organisms
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