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Microbial Program
… energy and ecosystem management. The program aims to generate high-quality genomic datasets, particularly for … single cell approaches. This includes linking strain-level genetic variation to ecological niche adaptations.  Single … and annotation of all publicly available genomes from three domains of life. It provides tools for analyzing the …
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Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… swaths of the bleached, skeletal remains of trees can be seen. These plagued patches have become kindling for the … commonly as Sudden Oak Death or by its acronym, SOD. Of the dozens of Phytophthora species, the most … “citizen science” project to generate real-time data for modeling and predicting the spread of a plant disease, …
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Evolution of a Fungal Gene Expression Regulator
… than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to … Fungal Genomes initiative of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … across 528 species. The researchers found that unlike most flowering plants and animals, fungi lack gene body …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Improved genome assembly and evidence-based global gene model set for the chordate Ciona intestinalis: new insight into intron and operon populations
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Phylogenomics and Comparative Genomics Highlight Specific Genetic Features in Ganoderma Species
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … science mission of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence …
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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing …
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An orphan gene BOOSTER enhances photosynthetic efficiency and plant productivity
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Fine Mapping of the Bsr1 Barley Stripe Mosaic Virus Resistance Gene in the Model Grass Brachypodium distachyon
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Better Crops With a Pointillist Approach to Plant Genomics
… using measurements from single cells to understand which genes help plants grow, get nutrients, weather drought, and more. And …
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