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Natural Prodcast Episode 21: Elizabeth Parkinson
… the promiscuity of one of the previously best studied SVR receptors. And so previously, a lot of these have been … And so there were studies that were done previously with SVR. But because those molecules were oftentimes … --really high. DAN: Yeah. Graduate school is a pressured environment, right? JACKIE: Yes. DAN: And so there's always-- …
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Natural Prodcast Episode 22: Alison Narayan
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Salicylic acid activates poplar defense against the biotrophic rust fungus Melampsora larici‐populina via increased biosynthesis of catechin and proanthocyanidins
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Directed Evolution of Flavin-Dependent Halogenases for Site- and Atroposelective Halogenation of 3‑Aryl-4(3H)‑Quinazolinones via Kinetic or Dynamic Kinetic Resolution
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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Natural Prodcast Episode 19: Bill Fenical
… a program that involves researching the local marine environment. I went out and picked up marine plants, I picked … using nutrients from the ocean. They weren’t doing environmental evaluations of what nutrients are there. So we …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science … viruses (from environmental metagenome samples) from IMG/VR , a database that is part of the Integrated Microbial … CheckV on IMG/M Data portal …
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Comparative proteomic profiles of the marine cyanobacterium Trichodesmium erythraeum IMS101 under different nitrogen regimes
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Exploring the limit of metazoan thermal tolerance via comparative proteomics: thermally induced changes in protein abundance by two hydrothermal vent polychaetes
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The fungus that made itself at home
… Serpula lacrymans has undergone in adapting to manmade environments. The Impact Due to its aggressive capacity to … in its ecological habitat, adapting to thrive in built environments. Summary Unlike white rots, brown rots break down … indoors and across borders, adapting to thrive in manmade environments. As reported January 5, 2018 in The ISME Journal …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools managed by the U.S. Department of … elements by incorporating short sequences from infecting viruses and phages. In the event of a new infection, the …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book … of white. To researchers searching for sequences of RNA viruses in large data sets, their work may be akin to … from the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into many more samples and …
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