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Understanding Wildfire Recovery, Starting in Soil
… floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. To get a … into how to model and track the forest recovery process.  Summary Most studies on post-wildfire soil microbiomes have …
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Disclaimer
… a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use … States Government nor the University of California nor any of their employees, makes any warranty, express or implied, including the …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. … their functional roles in their community. This study shows how the function-driven, single-cell screen can uncover … plethora of potential applications to industrial processes. Summary JGI researchers developed a function-driven, …
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Extracting the Secrets of Secondary Metabolites
… a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly … can then employ CRISPR in a variety of microbial hosts. Summary Photorhabdus luminescens proves fatal to insects. It … that quickly kill the host. Understanding exactly how P. luminescens and its secondary metabolites work could …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
Ancient  Chloroflexota s ditched their flagella and other … bacteria from the phylum C hloroflexota . Research shows that flagella were lost in other forms of  … for biofuel production and other sustainable applications. Summary Hot springs are environments of extremes, where both …
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Partnerships Development Team
… to JGI resources, as well as target academic, governmental and non-governmental institutions who haven't yet partnered … at large with access to high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. Click to learn more. …
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From Competition to Cooperation
… genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to … fungi play an integral role in soil carbon storage. Summary There are three types of fungal saprotrophs in the …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial communities. The Science A … The Blob, researchers developed a preliminary model of how marine microbial communities are affected by warming … by extension, the ocean’s capacity to act as a carbon sink. Summary As global temperatures rise, so do instances of …
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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User Support
The JGI Project Management Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop project … of the project’s completion and receive instructions for how to access your data, share with collaborators, and …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by … , 117-126 Berg, M. and Roux, S. (2021) Extreme dimensions — how big (or small) can tailed phages be?  Nature Reviews …
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An Integrated Dataset to Understand Ecosystem Interaction
Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship … microbial partners. The Science To help better understand how ecosystems work and how healthy they are, a recent data … of analyses that contribute to a sustainable bioeconomy. Summary The 27 samples studied by researchers came from two …
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