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Axel Visel
… and implementation of strategic initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max … computational and experimental sequence-based methods for elucidating the gene regulatory landscape of vertebrate … LA, Rubenstein JL (2013, * corresponding author). A high-resolution enhancer atlas of the developing …
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Synthetic Biology Lab
Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic biology applications group. The … such as those involving biosynthetic clusters, or high complexity combinatorial libraries.  We have developed … particular through adoption of lab automation enabling ever-higher levels of throughput. We also develop methods for …
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JGI@25: Solving the Mystery of the Missing Oil
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … the Deepwater Horizon oil rig explosion that dumped nearly five million barrels of light crude oil spilling into the … collaborations, Lab researchers working with the JGI successfully simulated how successive waves of microbial …
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JGI & KBase at PAG XXVII
Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology Knowledgebase (KBase) will … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks … Promoters Regulating Poplar Drought Response 7:27 PM Highlights from Genome of Miscanthus 7:45 PM Transcriptome …
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JGI Early Career Researchers Featured in mSystems Special Issue
In a special issue of mSystems , out May 14, 2019, JGI researchers are among the authors who offer perspectives on what the next five years of innovation could look like. In one article, … would be the foundation upon which researchers can develop high-throughput and high-resolution studies of interactions …
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research (BER), a program within the DOE Office of Science. …
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FICUS Overview
… and streamlines this process, but enables scientists to conduct fundamental science experiments in ways they couldn’t … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … of Work document. … What happens after I submit? … User Programs …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). … Science  363(6425):350-352 Harrington LB, et al (2018) Programmed DNA destruction by miniature CRISPR-Cas14 …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … is July 31. You can learn more about our Community Science Program here .  …
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Data Ecosystem
… expand access to integrated data, improve tools and infrastructure as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … of new informatics tools specifically optimized for high-performance computing environments. … KBase is a …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early … plant genomics community. The project’s aim is to generate high-quality genome assemblies and annotations for 35 …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional … This year’s project goals range from improving crop productivity for bioenergy through enhanced red-light energy … sequestration into sustainable biomaterials, and developing high-throughput methods to reveal metabolic pathways that …
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