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A workflow for capturing the genetic make-up of specific uncultivated … and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in generating genome sequences for members of the microbial world through bulk community sequencing …

Our research is focused on the discovery and characterization of novel … (2022) Giant virus biology and diversity in the era of genome-resolved metagenomics. Nature Reviews Microbiology volume 20, 721–736 JC Villada, F Schulz (2022) The endosymbiotic box of …

Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …

A deep dive into microbial genomics reveals one bacterial species is made of … periodically at different depths. In order to determine the genome structure of SAR324 cells and their gene expression, … by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore Foundation grant …

This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve …

Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program … the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became the … dark matter through global metagenomics. Nature . 622(7983):594-602. Camargo AP. et al. (2023) Identification of …

…   The JGI is excited to announce the 18 scientists selected for our 2025 … Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to Antarctica’s photosynthetic mats — to reveal how these systems adapt and contribute to …

… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single largest … aim is identifying chemical compounds that could inhibit microbial methane production. Another effort is in using …

… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … (Hear more from on Chlamy from Sabeeha Merchant in this episode of JGIotas, a Genome Insider podcast minisode.) Since the JGI’s early sequencing …

Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal … noted. “I spent a good portion of 2016 and all of 2017 looking for  C. californicus across the California-Baja …