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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department of Energy Joint Genome Institute … feedback on pangenome tool development. Maurice is a fungal evolutionary ecologist with interests in …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … While all RNA viruses have a gene that encodes for an enzyme called RNS-directed RNA Polymerase (RdRP), necessary …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … poorly-studied algal and viral genomes, and integrate with key DOE Office of Biological and Environmental Research … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie …
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Taking Stock of the Known and Unknown Microbial Space
… Metagenomic datasets could help map out microbial diversity hotspots Over the past few … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … experimental validation.  Microbes run the world, playing key roles in regulating global nutrient cycles. The …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …
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High Density Genetic Maps of Seashore Paspalum Using Genotyping-By-Sequencing and Their Relationship to The Sorghum Bicolor Genome
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the field of genomics through open access to … Genome Project (HGP), and building upon the principles for open access in the field of genomics established in  … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex chromosomes of mammals is, for the first time, … Sex in plants can be befuddling. Most species are hermaphrodites, expressing both male and female gametes in one … in mammals: a structure that helps correct deleterious mutations. The Impact Shrub willow and its close relative  …
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The intruders that stole the master key
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Biosensor-driven strain engineering reveals key cellular processes for maximizing isoprenol production in Pseudomonas putida
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Reductive Enzyme Cascades for Valorization of Polyethylene Terephthalate Deconstruction Products
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