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… . Camargo A. et al. 2023. Identification of mobile genetic elements with geNomad. Nature Biotechnology . Schulz et al. …

… … … … … … … Blurring the Line Between Plasmids and Phages … Polymorphisms Created by Transposable Elements … Evolution of the … … Cross Species Integration of Single Cell Transcriptomes … Exploring and Visualizing P. hallii Mutant Library … …

… environment and focuses on sequence reads to link mobile elements such as plasmids to microbial host cells. In a … global ecological and environmental processes, especially by modifying host cell metabolism and altering cell fitness. … planet’s viral diversity has advanced drastically, aided by genome assembly from metagenomes. This is a critical step …

… of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s list features 6,849 … Those from the JGI whose publications rank in the top 1% by citations for field and publication year are: Igor … geNomad that identifies and classifies mobile genetic elements based upon their gene content and their genetic …

… can demonstrate how competencies can be built. We recommend exploring how KBase (www.kbase.us) can support biological … analytics platform provided to the research community by DOE. Email [email protected] if you have questions about … proposal call is open year-round, but proposals submitted by September 21, 2020, will be included in the next review. …

… to large ecosystem-level processes for the first time. By collecting data from 27 different poplar ( Populus … and integrated data set will help identify how different elements of the ecosystem interact and respond to changes in … to a sustainable bioeconomy. Summary The 27 samples studied by researchers came from two environments: natural forests …

August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and … to “Soup” The work started with yeast strains engineered by Alper’s team to convert the sugar glucose to the products … start of a beautiful collaboration,’” Alper said. “We’re exploring not just what can be enabled by this technology, …

A collaborative team led by Hao Tan from the Sichuan Academy of Agricultural Sciences … they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related decomposition mechanisms … catabolic enzymes for the decay apparatus. Consequently, it created a subtle flow of nitrogen from the soil towards the …

… model fungus  Neurospora crassa . The Science A team led by researchers at the University of California, Berkeley … to reconstruct and model gene regulatory pathways used by the filamentous fungus  Neurospora crassa, and to … Program through a proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining the …

The battle waged below the Earth’s surface is reconstructed by combining a study of microbial communities (metagenomics) … CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from infecting viruses and …

Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri U. et al. …

On the UEC she intends to represent the user community by providing input on JGI policies and capabilities that … marine flowering plants, and their microbiomes. She is exploring the seagrass rhizosphere in her ongoing CSP New … analysis, as well as how they can be shared with and used by students. Solomon  is an associate professor at the …