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The Genome Portal of the Department of Energy Joint Genome Institute
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the … initiatives at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, … Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   …
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Frederik Schulz
… Dr. Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… like plasmids, the picture is far from complete.  In 2021 , scientists at St. Jude Children’s Research Hospital … Office of Science of the U.S. Department of Energy [DE-AC02-05CH11231]. Dr. Charles Gawad has been supported for this work by …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… in this hypersaline environment, which can range from 8% to 28% salinity. We have toxic metals, so these concentrations … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called ABC, the …
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Natural Prodcast Episode 18: A CSP Primer
… info about the CSP, FICUS, New Investigator and Functional Genomics calls. For my audience, all of these programs can … mixture of, for example, metatranscriptome sequencing, metagenomics, single cell genomics. We even do the flow … We don’t want to get a proposal that’s just asking for 20 microbial genomes. That is not a good fit for our annual …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] He’s also a … genome mining together. Marc was the Head of Experimental Genomics there, before he decided to leave for graduate …
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JGI & KBase at PAG XXVII
… Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from … how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks … and KBase will be co-located at Berkeley Lab’s Integrative Genomics Building (IGB). Click here to learn more about this …
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Effects of sample treatments on genome recovery via single-cell genomics
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Expanding the genomic encyclopedia of Actinobacteria with 824 isolate reference genomes
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements metagenomics studies. The Science Researchers demonstrated the value of conducting large-scale single cell genomics by collecting nearly 500 single cells from a single … User Facility, is supported under Contract No. DE-AC02-05CH11231. This work was supported in part by a Natural …
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