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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … Science user facility, aims to explore applications in the life sciences that can be ported to the GPU architecture. A … Officer Kjiersten Fagnan of the upcoming event. “The tools we use to process and analyze these data are diverse …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand … data set will help identify how different elements of the ecosystem interact and respond to changes in the …
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Science Programs
… The JGI’s Science Programs offer support to users and their … lend their expertise to enhance the scientific impact of user projects, develop cutting-edge approaches for and with users, and create computational tools and resources for them. Their concerted efforts help …
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Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla
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Horizontal gene transfer and gene dosage drives adaptation to wood colonization in a tree pathogen
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … don’t have a great way to resolve root respiration from microbial processes, but we’re not mixing the tracer with … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging
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The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user … users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is …
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Association mapping, transcriptomics, and transient expression identify candidate genes mediating plant–pathogen interactions in a tree
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Webinar: MycoCosm Tutorial
… fungal genomes, omics data and comparative analysis tools. Questions and Answers 1.  Q(uestion): Do you accept … A(nswer): Our focus is on fungi, algae, plants, and the microbial world but we also annotated several Phytophthora … ( https://phycocosm.jgi.doe.gov/oomycota ) on PhycoCosm tree with several sequenced genomes. 2.  Q: How exactly …
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Separation of life stages within anaerobic fungi (Neocallimastigomycota) highlights differences in global transcription and metabolism
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