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Microbiome Data Science Team
… Biology is currently experiencing a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational technology … and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in the group include …
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are … at the JGI, Gros allowed him to continue research on the project. At the JGI, Volland began studying Ca. T. magnifica …
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Web of microbes (WoM): a curated microbial exometabolomics database for linking chemistry and microbes
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Degradation of Bunker C Fuel Oil by White-Rot Fungi in Sawdust Cultures Suggests Potential Applications in Bioremediation
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced … validate how mycorrhizal fungi play an integral role in soil carbon storage. Summary There are three types of fungal … the European Research Council under the European Union’s Horizon 2020 research and innovation programme under grant …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … miner and has been involved with the AntiSMASH and MIBiG projects. And I found her review in natural product reports on the evolution of genome mining and microbes with Mohammad Alanjary and Tilmann Weber to be a …
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Identification and characterization of a skin microbiome on Caenorhabditis elegans suggests environmental microbes confer cuticle protection
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The Chlamydomonas Genome Project, version 6: reference assemblies for mating type plus and minus strains reveal extensive structural mutation in the laboratory.
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Bacterial response to the 2021 Orange County, California, oil spill was episodic but subtle relative to natural fluctuations.
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing … genome-scale engineering technologies to control plants and microbes for bioproducts and biomaterial manufacturing.  … supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the …
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