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… sample receipt to completion of standard analysis.  Raw data is provided for all sequencing products below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all …

… and assembly group: Our production group operates as user facility that aims to provide access to … the broader community.  We focus our efforts on integrating database mining and sequence design with scaling the … methods for converting digital information from sequence databases into biotechnological or environmental …

… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: … (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the DOE Joint BioEnergy Institute, are …

… restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … And so now that’s what I’m joking about having a lot of data. It’s a lot of metabolomics data sets. So what have we …

… institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users … begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to … advice!      … The deliverables can range from raw sequence data to well-annotated assembled genomes to synthesized DNA …

As an Integrative Genome Science User Facility, the JGI plays a leadership role in enabling … draw from the infrastructure of Genomic Technologies and Data Science & Informatics. The JGI also sustains a vibrant …

… joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in … and plants. Working with a talented team of scientists and software engineers, Dr. Goodstein currently leads the Plant … responsible for genome annotation, comparative analysis and data distribution for the JGI's direct collaborators and the …

The JGI User Executive Committee (UEC) recently welcomed three new … Society of America and is also a National Microbiome Data Collaborative (NMDC) Champion. As an early career … early career researchers and new users, advise on data release and sharing policies, and help develop programs …

… and analysis will be performed by the JGI at no cost to the user. … All proposals first undergo technical review by JGI … below .  … What happens after I submit? … Prospective users with specific questions regarding their proposed …

The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of … in giving a voice to JGI users who feel that certain data sharing policies fail to represent the needs of large … unaware that [public but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which …

… learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …

The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …