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… so starting from some of the enzymes that we had the most data on and knew the most about, working with my … off– JACKIE WINTER: No. ALISON NARAYAN: Often, they’re abbreviated too from alpha ketoglutarate to just AKGs. In my … with. DAN UDWARY: Yeah. ALISON NARAYAN: And there are other tools that I think are really useful, that again are set up …

… key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …

… They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature Biotechnology  … created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …

… . You can find additional webinars covering how to use our data portals here.  …

… institution type and at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users from certain countries (Iran, North Korea, Cuba, and … begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to …

… of genomics through open access to resources and promoting data sharing to accelerate discovery and maximize the … to engage the community to inform necessary changes to JGI data policies. Since completion of the HGP, the JGI has … to uploading sequence data generated on behalf of its user community to NCBI as well as to the  data portals that …

… learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …

… Institute (JGI)’s Fungal and Algal Science Program and JGI users have been at the forefront of tackling this enormous … Berkeley National Laboratory (Berkeley Lab). “These data can also be used for machine learning and artificial … capture the vast nature of fungal diversity. Examining databases like MycoCosm , the JGI’s online fungal genomics …

… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …