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Community Science Program
… and analysis will be performed by the JGI at no cost to the user. … All proposals first undergo technical review by JGI … below .  … What happens after I submit? … Prospective users with specific questions regarding their proposed …
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Introducing New Members of the JGI User Executive Committee
The JGI welcomes three new members to their User Executive Committee (UEC) – Jack Gilbert, Ashley Shade, and Jason Stajich! They join six other JGI users already serving on the UEC – go here to view the full … in access, analysis and sharing of JGI-generated data. She is also interested in reaching and engaging with …
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Genome-wide role of codon usage on transcription and identification of potential regulators
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … synthesis support, sequencing, integrative -omics, and data mining, empowering research collaborators to take on … screens for characterization of new enzymes and use the data we generated to train machine learning models now …
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Natural Prodcast Episode 8: Eric Schmidt
… learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I … proteins interact with each other. There’s a lot of leading data from excellent groups about specific interaction … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You …
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Identifying genomic data use with the Data Citation Explorer
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Natural Prodcast Episode 23: Aaron Puri
… restricted niche. And they do need broad host-range genetic tools so it’s more complicated than working with something … thing I’ve learned is that when JGI gives you a ton of data you better have someone really smart to be able to … And so now that’s what I’m joking about having a lot of data. It’s a lot of metabolomics data sets. So what have we …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… researchers searching for sequences of RNA viruses in large data sets, their work may be akin to finding a single … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Advances in sequencing technologies and computational tools have uncovered a diversity of viruses that infect not …
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A Complex Confection Decoded: Sugarcane Reference Genome
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The reference genome of R570 is available on the JGI plant data portal,  Phytozome .   … The work (proposal: … (https://ror.org/04xm1d337), a DOE Office of Science User Facility and the DOE Joint BioEnergy Institute, are …
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Natural Prodcast Episode 5: Brad Moore
… before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … air, email us at [email protected] .  And because we’re a User Facility, if you’re interested in partnering with us, …
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Phosphate limitation responses in marine green algae are linked to reprogramming of the tRNA epitranscriptome and codon usage bias
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You Can Move, But You Can’t Hide
… created by researchers under the direction of Microbiome Data Science Group Lead Nikos Kyrpides at the U.S. … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory … for identifying viruses and plasmids. Until now, most other tools have focused on identifying only specific plasmids or …
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