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Individual genome assembly from complex community short-read metagenomic datasets
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on … Microbial Genomes & Microbiomes (IMG/M) data and workflows for computational analysis and interpretation of sequence … data with existing bioinformatic methods to bridge the gap from sequence to biology. …
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Plant Microbial Interactions Group
… by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and … experimental characterization methods, in addition to bioinformatics tools to elucidate phage function in this tripartite … For further details, please reach out to …
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and researchers to harness the traits that let … More than a discovery in itself, this pangenome is a tool. It shows genetic variation across sorghum varieties …
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Empirical Comparison of Visualization Tools for Larger-Scale Network Analysis
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Multifunctional cellulases are potent, versatile tools for a renewable bioeconomy
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Deconvolute individual genomes from metagenome sequences through short read clustering
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Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes
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Metagenomes and Metagenome-Assembled Genomes from Microbial Communities Fermenting Ultrafiltered Milk Permeate
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Gene Expression: From On-Off Switch to Dial
… approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … UEA and including the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … address some of the most pressing challenges of our time. For more information, please visit  …
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