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Mechanically induced localisation of SECONDARY WALL INTERACTING bZIP is associated with thigmomorphogenic and secondary cell wall gene expression
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Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth
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Doubling Down on Known Protein Families
… study also references data from the JGI’s  Genomes from Earth’s Microbiome , or GEM catalog). Then they removed any … that the majority of these protein families belonged to bacteria and viruses, though 6 million of the sequences … . … NERSC Collaborations Help Illuminate Earth's Biodiversity … From Our Partners …
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MAGI: A Method for Metabolite Annotation and Gene Integration
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Simon Roux
… and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established … prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology 21, e3002083 Roux et al., 2021. … revealed as pervasive in bacteria and archaea across Earth’s biomes. Nature Microbiology 4, 1895–1906. Schulz et …
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Tanja Woyke
… and assumed the Deputy Director of User Program position in 2021. In addition to her JGI appointment, she also holds an … Analytics 2020 van Niel International Prize for Studies in Bacterial Systematics 2020 Elected fellowship in the … 20: 721 Nayfach et al. 2021. A genomic catalog of Earth’s microbiomes. Nature Biotechnology 39, 499-509. …
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Hiroshi Otani
Joint Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly … methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he studied … trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, …
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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Sulfur metabolites that facilitate oceanic phytoplankton–bacteria carbon flux
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Metabolite release by nitrifiers facilitates metabolic interactions in the ocean
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The multicatalytic compartment of propionyl-CoA synthase sequesters a toxic metabolite
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Model Fern Reveals Insight into DNA Thievery in Ferns
… to protect themselves from environmental stresses, ferns’ secondary metabolites and associated genes are great resources for … to S.C.); the Key R&D Program of Zhejiang Province (grant 2021C02009 to S.X.) and Zhejiang Provincial Natural Science …
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