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Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered … new technologies, and made a few discoveries about the microbial mat denizens.  …

… that viruses play in their ecosystems, particularly in freshwater ecosystems. …

IMG kind of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial … effect is gone. You can transplant the effect by taking the microbial fraction out of one soil, transplanting it into … assemble a really high quality metagenome of the endosphere microbial communities for all the bacteria that are living …

… was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient cycling, greenhouse gas …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s climate. Most methane is produced in environments without oxygen through a … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, …

… right. So I did a PhD in microbiology at MIT, and I studied microbial ecology. I studied Vibrio species in the ocean, so … We’re looking at a schematic of different pathways in a microbial cell, it looks like. It could be a eukaryotic … I’m looking at it with, you know, it’s within a species or microbial population, you have some set of shared traits …

Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows …

WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing … is organizing nearly a dozen hackathons around the world in 2019, only the JGI hackathon is particularly focused on … code to a new architecture. Proposals are due March 1, 2019 for the JGI hackathon, set for May 6-10, 2019, in …

… the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen BP, … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in …

A deep dive into microbial genomics reveals one bacterial species is made of … Time-series (HOT), they collected samples of the ocean’s microbial communities periodically at different depths. In … software suite, BBTools , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By …