Results

Crysten Blaby-Haas
… capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and engineering. She … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria … S, Blaby-Haas CE, Friedrich T, Daldal F, Koch H. (2019) The  cbb 3-type cytochrome oxidase assembly factor …
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JGI@25: Roots of a Mutualist Relationship
… (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main … Fungal Datasets …
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Identification of a gene encoding the last step of the L-rhamnose catabolic pathway in Aspergillus niger revealed the inducer of the pathway regulator
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The SlZRT1 Gene Encodes a Plasma Membrane-Located ZIP (Zrt-, Irt-Like Protein) Transporter in the Ectomycorrhizal Fungus Suillus luteus
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Patterns and drivers of fungal community depth stratification in Sphagnum peat
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The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies.
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Host genotype controls ecological change in the leaf fungal microbiome
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Fungal diversity and function in metagenomes sequenced from extreme environments
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MycoCosm Tutorial
… Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. Presented by …
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Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain chemolithoautotrophy in heterogeneous environments
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John Vogel
… with their microbiomes. In addition, his group conducts comparative genomic research to understand the evolutionary … Varoquaux, et. al.N. 2019 Transcriptomic analysis of field-droughted sorghum from … Natl. Acad. Sci. 116 (52) 27124-27132 Sasse, et. al.J. 2019 Multilab EcoFAB study shows highly reproducible …
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Len Pennacchio
… 2021-  NLM Board of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in … Council, National Human Genome Research Institute, NIH 2019   Lawrence Berkeley Laboratory Director’s Award for … Genomics Lab VISTA Enhancers VISTA Cardiac Enhancer Browser ENCODE FaceBase …
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