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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… students summer research experience at the JGI. On July 26, 2018, the JGI celebrated the culmination of the fifth summer … Group who has mentored several of the students including 2018 intern Candace Cole, noted that “each year, they bring … fellow in Tanja Woyke’s Single Cells Group who mentored 2018 intern Akshay Paropkari, echoed the sentiment, saying, …
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Evidence of Asexual Overwintering of Melampsora paradoxa and Mapping of Stem Rust Host Resistance in Salix
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JGI Scientists Pen Genome Watch Articles
… the  Nature   Reviews column all started with an email in 2018.  Tanja Woyke , who leads the  Microbial Program at the … move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal … to (meta)genomics, and at least one of the papers they reference should be hot off the press. She tells prospective …
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Kjiersten Fagnan
… Dr. Fagnan was appointed CIO of the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics … and the ASCR Future Computing Methodologies workshops. In 2018, Dr. Fagnan was part of the Gordon Bell prizewinning … Coach – Girls who code, Technovation Gordon Bell Prize, 2018 NERSC, CRD Petascale Postdoctoral Fellow …
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A haplotype-resolved reference genome for Eucalyptus grandis
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… what we strive for,” Visel said. Practical Applications for Fungi Wint began working on the project that culminated in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles Darwin’s “survival of …
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JGIota: Looking Back at Sequencing for Soybeans
… Peter van Esse (The Sainsbury Laboratory) and Sebastien Duplessis (INRAE). …
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Metabolic Modeling of Fungi
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Reference genome sequence of the model plant Setaria
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The Reference Genome of the Halophytic Plant Eutrema salsugineum
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A Catalog of Reference Genomes from the Human Microbiome
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JGI@25: Roots of a Mutualist Relationship
… (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available on the fungal portal MycoCosm, many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual …
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