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… Highlighting the latest interactive version of the JGI’s plant data … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  … possible given the finite staff available to the Phytozome project. What will happen to Phytozome v12 URLs after August …

… system traces polyploid genome evolution. Flowering plants abide by the concept, “the more the merrier,” with respect to their genomes. In their base state, they are diploids with two … flowering plants; at least once during their evolution, the genomes of flowering plants multiply. Over time, plants lose …

… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … Avinash:   JGI puts huge efforts into generating reference genomes for new species allowing it to fill gaps in the …

… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art … Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance … of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data Generation …

… The Facilities Integrating Collaborations for User Science (FICUS) … and multidisciplinary nature of DOE mission science projects, this initiative aims to encourage innovative … and selection processes, making it difficult to propose projects that truly integrated the capabilities of more than …

… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new … technology in order to enhance the quality of single-cell genomes and directly link functional information with … uniquely offers the first quantitative Stable Isotope Probing (SIP) Metagenomics pipeline that utilizes internal …

… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds … anything. The collaborative consortium behind the GROWdb project demonstrates not only how researchers can …

… Tracking evolution of symbiotic lifestyles across multiple fungal … lineages. The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader … lineages. To learn why, researchers analyzed 135 fungal genomes representing major fungal families, including those …

… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … Program , sequences of several hundred green millet plant genomes were generated, though the final analyses focused on … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …

… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global cocoa bean … Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the plant team … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …