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Natural Prodcast Episode 23: Aaron Puri
… back for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, … And it actually was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that …
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Data Ecosystem
… its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise … specifically optimized for high-performance computing environments. … KBase is a critical partner in enabling systems … analyses, such as metabolic modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to …
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Special Initiatives & Programs
Early Career Research Program .   If “BERSS” is not mentioned in the BER funding call, proposals are NOT eligible for … may be submitted at any time. Support is limited to work included in the BER-funded proposal, and PIs must … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … a very long process. And then finally, if all of that still works, and you have a good target and a good drug, and …
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat
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CO2 response screen in grass Brachypodium reveals the key role of a MAP kinase in CO2-triggered stomatal closure
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … by an international, multi-institutional team. The work was a joint effort led by scientists at the Center for …
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Examples: Successful LOIs & Submissions
Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for … symbionts … Elucidation of the gene regulatory networks governing terpenoid-mediated plant environment …
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Correlation-based network analysis combined with machine learning techniques highlight the role of the GABA shunt in Brachypodium sylvaticum freezing tolerance
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … to succeed, and we talk about an ongoing project I’ve been working with him on as an exploration into the secondary … So, this was when we started saying, we have to have the genomes. We have to look at the full picture of these. And …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg … Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … a good reason nobody’s done it; it’s a heck of a lot of work. I wouldn’t have done it without the contribution of …
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