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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada (CICESE) in her first microbial ecology paper in the journal PLoS One . “Puerto …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… enabled by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … By leveraging metagenomics to sample the entirety of a microbial community out in its natural environment, … the avenues for exploring methane as a source of bioenergy, better understanding the global carbon cycle and greenhouse …
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JGI@25: Strengthening Soybean
… to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … the first legume species with a published complete draft genome sequence. At the time, the vital global source of …
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An Integrated Dataset to Understand Ecosystem Interaction
… the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how healthy they … were provided by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science … ( Panicum virgatum ) is a candidate bioenergy feedstock with a complex genome with multiple copies of its … has adapted to severe summer droughts, these plants were better able to uptake soil water compared to the other …
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Digging into Microbial Ecosystems Deep Underground
… at Colorado State University have many questions about the microbial communities deep underground, and before the … The video complements a recently published paper with first author Amundson in the journal Microbiome . The …
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Fungus Fuels Tree Growth
… root cells. The fungus is almost always found among and within poplar trees, and in an effort to understand its … interest to the U.S. Department of Energy (DOE). By better understanding how poplar responds to its intimate … partnered with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis
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Microbial species delineation using whole genome sequences
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Improving Microbial Genome Annotations in an Integrated Database Context
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The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes
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Abiotic selection of microbial genome size in the global ocean
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