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Large-scale protein level comparison of Deltaproteobacteria reveals cohesive metabolic groups
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Beyond linear sequence comparisons: the use of genome-level characters for phylogenetic reconstruction
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Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric …
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Succession of physiological stages hallmarks the transcriptomic response of the fungus Aspergillus niger to lignocellulose
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, as well as successful submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User … Linking lignin engineering to drought stress resilience: …
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User Support
… Effective July 27, 2026, the JGI will move to a new login service, requiring the use of an ORCID account with … resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work … data analysis tool tutorials, as needed Upon completion of all work associated with your proposal, your Project Manager …
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation
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Comparison of stress tolerance mechanisms between Saccharomyces cerevisiae and the multistress-tolerant Pichia kudriavzevii
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A Comparison of the Biotechnological Potential of Marine and Terrestrial Species of Two Orders of Sordariomycete Fungi
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New Family of Tungstate-Responsive Transcriptional Regulators in Sulfate-Reducing Bacteria
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