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Genomic Methods and Microbiological Technologies for Profiling Novel and Extreme Environments for the Extreme Microbiome Project (XMP).
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Rapid whole-genome mutational profiling using next-generation sequencing technologies
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A One-Stop Shop for Analyzing Algal Genomes
… an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … to see their favorite alga’s predicted genes and their organization, and analyze genes in the nucleus and …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … of years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really … standards.  A year later, her team used proteomics, genomics and transcriptomics to discover another advantage …
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Examples: Successful LOIs & Submissions
… submissions to our CSP New Investigator, CSP Functional Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared with … of simplified soil communities with high and low carbon use efficiency across differing moisture treatments … …
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular characterization capabilities in just … Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS proposals have helped advance …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… scale: fungi stretch a network of tendrils called arbuscules into a plant’s root cells, and both organisms … circular capture areas roughly 55-microns in diameter — about the width of a human hair. At such resolution, this … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass
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Genome organization of the vg1 and nodal3 gene clusters in the allotetraploid frog Xenopus laevis
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Leptothrix ochracea genomes reveal potential for mixotrophic growth on Fe(II) and organic carbon
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Plant-Microbial Interactions Group
… detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … and computational approach, we employ various omics technologies, strain engineering and experimental …
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