Results
… sequencing products below. In addition, JGI will submit raw sequence data to SRA at NCBI once the standard analysis is … in length, cloned into vector of choice Glycerol stock of sequence verified clone 102/NA DNA Synthesis Constructs … in length, cloned into vector of choice Glycerol stock of sequence verified clone 170/NA DNA Synthesis Constructs …
Learn more
… more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … for us– what organisms people use for genome mining, why it’s called genome mining, how the biosynthetic gene … disparate environments. There’s some marine. There’s some soil samples. There’s human gut samples. There’s lots and …
Learn more
… pipelines. You will receive automated emails as raw sequence data becomes available, and as analysis is …
Learn more
… at genomes and seeing where the really hard things to sequence were, and wondering what those … what those were … functional was these secondary metabolite pathways. So why was that? What is it about secondary metabolite pathways … it’s very situational. And every microbe is a special snowflake. So… ALISON: Yeah, I mean, would you say that all …
Learn more
… in doing so enabled the JGI to be the first to publish the sequence analysis of the target chromosomes 5, 16, and 19, …
Learn more
… enzymes are, right? ALISON NARAYAN: Yes, and so that’s why I don’t like that sentence. I think that sometimes, we … NARAYAN: I like to think every enzyme is a little snowflake. JACKIE WINTER: To treat it so it’s a delicate … association that might help? Like, if you have an unknown sequence or new flavin monooxygenases, you could say, oh …
Learn more
… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … the paradigm of how to discover natural products. So, why I’m very excited to be working with Dan, you, with the … develop enabling technologies. ie how to translate the ATGC sequence into discrete small molecules. So, Dan, I’m very …
Learn more
… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … think the terms we should be using for what we do are, and why there and why it’s important to make those distinctions. … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …
Learn more
… by exploring plants’ role in capturing carbon, detoxifying soils, interacting with other organisms, and adapting to … of how plants have naturally adapted to varied climate and soil conditions around the globe to identify genes to … manipulation in the laboratory. Both germplasm (sequenced mutants and natural accessions) and protocols …
Learn more
… you maybe explain what’s going on with their biology and why they’re so important to natural products? ERIC: Sure. … I’ve seen you give a few talks on that. Can you tell us why cone snails are so cool? ERIC: So cone snails are … turns a peptide, for example, from a disordered sequence into an antibiotic that kills bacteria through a …
Learn more
… the program supports foundational research related to soil nutrient cycling and health, terrestrial biogeochemical … samples — including microbes, fungi, plants and soils. Through a combination of experimental workflows and … the interactions between plants, microbes, and soils relevant to key environmental processes and the …
Learn more
… And at the time, it was really exciting when people would sequence [DNA]. The genome was– well, that hadn’t really … polyketide synthase and then P3. We still don’t know why 20 years later. JACKIE WINTER: It’s pretty amazing, … off through these areas. And you can do– with a teaspoon of soil from outside, you maybe have to do a 10,000-fold …
Learn more

