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… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.” Nat …

… least, talk to us, first about my definitions of things and why I am wrong, and also talk about some of the great … I mean, we all know, from experience, that when you have a culture, you grow it in one medium, exactly what you think … to approach it is more related to what JGI does, which is sequence genomes. And we just published last year in the …

… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … . … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to nominate their strains … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …

… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. … favorite bacterial community. For us, it’s these methane oxidizing bacterial communities that we like to look through …

… learned a lot so much history from this conversation about why the ocean was basically unexplored until the 70s, and … out, and we did not know what to do. We did not know how to culture marine isolates from the ocean. We didn’t know … forward to seeing the data when it finally gets off the sequencers. The pandemic has obviously slowed JGI down a …

… … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …

… there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … metabolites evolve– who makes them, how do they spread, why do they spread in a certain way from one bacteria to … it would work, but we actually found fosmids. And we sequenced the whole fosmid at the time with Sanger …

AF) have been computed for nearly 28,000 bacterial and archaeal genomes. By clustering genomes based on their … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …

… stories about natural products, so you can get a feel for why I think they’re so important, and we’ll start to explain … more about some of the background and sort of the reasons why we want to do this. And also to provide a little more … more. And then eventually they figured out that they could culture the plant cells and produce enough that way in …

… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … with human health and increasing our longevity and agriculture. And there’s so many applications. So it was really … have an E. coli strain that we’ve been working on that we sequenced the genome. And it has 17 resistant genes on a …

Corps, I decided I wanted to go into international agriculture. I had really changed my mind. I was thinking of … out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk …