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IMG Group
The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the … DNA design and synthesis, metabolomics and computational analysis that enable systems-based scientific approaches to … scientific discovery. Projects focused on organisms for comparative purposes, on model systems for microbe-microbe …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… is like, what’s your origin story in natural products? Why are you doing this? JACLYN WINTER: I’ll kind of go back … a BGC fragment can be useful in some way if you’re doing comparative analysis. We want to make sure we had everything … Endpoints documentation API description/help SMC Code of Conduct …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … and streamlines this process, but enables scientists to conduct fundamental science experiments in ways they … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with … of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … there are any kind of dated references to the news, that’s why. But it was a really fun conversation. And I think … take to improve on the data side of things and sequencing analysis side of things to really start to be able to …
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Natural Prodcast Episode 18: A CSP Primer
… us guidance on what kinds of research to support and conduct. I already told you what a CSP is, but one other … that describe the work. In general. Scientific merit and why it’s important. The DOE mission is one of these … into our integrated microbial genomes system, which is our comparative analysis system. Once that is completed, the …
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Data Policy & Support
… we provide. … Read our research integrity and data code of conduct. … Data Management at the JGI … JGI Scientist Code of Conduct … Additional Resources  …
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Data Ecosystem
… cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … will be the development of tools and infrastructure for microbiome data science, and the development of new … modeling, that go well beyond genome annotation and analysis. The JGI and KBase seek to enable users to …
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Metabolomics
… functional genome annotation, improves understanding of the role small molecules play in diverse biological … based methods in combination with advanced computational analysis.   Overview of metabolomics products At JGI, … your results as well as our library standards. … Metabolite Analysis & Metabolomics Instrumentation … Metabolite …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to … on JGI Advisory Committees are outlined in this Code of Conduct. … The UEC represents the JGI user community and is …
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DNA Synthesis Program
… … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … users to navigate across sequenced fungal genomes, and to conduct comparative and genome-centric analyses of fungi and …
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