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… projects of relevance to Department of Energy (DOE)  Mission Areas . Through this program, the DOE aims to advance … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … accepted proposals, sequencing, synthesis, metabolomics and analysis will be performed by the JGI at no cost to the …

… initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI … for this call may be submitted at any time as brief white papers. Applicants may submit up to two proposals per … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the annotation and analysis of (meta)genomic, (meta)transcriptomic, and … on:  Developing state-of-the-art data processing and analysis pipelines for the interpretation of microbiome …

The CSP Functional Genomics call is to enable users to perform … accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s …

PMO works with users, JGI scientists and technical staff to onboard users and guide them through the process of working … PMO Lead, Metabolomics Program Kerrie Barry Plant and Algal Genomics Natasha Brown Supply Chain Manager Tijana Glavina … DNA Synthesis and Single-Cell Genomics Vivian Ng Fungal Genomics …

The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

… to decode the genomes of microbes in their natural environments. This work encompasses bacteria, archaea, and … tools and visualization resources that support user analysis of biogeochemically-relevant pathways, enabling … such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and …

… and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy and nutrient … a combination of experimental workflows and computational analysis, JGI scientists are able to link metabolic activity …

The JGI has a strong interest in seeing that the data produced by the … synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … Dariia et al. (2023)  A standardized quantitative analysis strategy for stable isotope probing metagenomics …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … artificial Intelligent/machine learning approaches in data analysis and interpretation is creating new opportunities … Science  356: 82-85 Ovchinnikov S. et al. (2017) Protein structure determination using metagenome sequence …