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Environmental Genomics Group
… qSIP quantifies incorporation of isotopes from labeled nutrients into biomass. When paired with metagenomics, qSIP can decipher active microbial functions in situ. This … Metagenome quantitative stable isotope probing analysis …
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JGI Snapshot
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JGI Advisory Committee
… The JGI Advisory Committee (JAC) is convened by the JGI Director to provide guidance on the Institute’s … management, and operational objectives. Serving as JGI’s principal external advisory body, the JAC includes …
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The JGI Leadership Team
… the direction of programs and initatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Metabolomics Technology Group
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal online … (WIP) interface.    For commonly asked questions about JGI’s proposal calls and proposal submission, as well as … The “User” signing the JGI User Agreement will be an authorized representative from …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… As SIP experiments shed more light on microbial communities … returns on these advances. Over the last two decades, Stable Isotope Probing (SIP) has opened vast windows into … RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP allows researchers to go beyond understanding …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their … microbial activity measurements, such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics … microbial dynamics, evolution, and ecosystems. Sequencing technologies have expanded viral diversity knowledge, …
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Who We Are
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric genomic science user …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … MOUNCEY: Oh, yeah, I think it hits in all parts of our technologies. Nowadays people are really looking at these … right now. And that by next year, things are a little more stable and we can all get together in person.  NIGEL …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory (EMSL) , successful applicants can also access resources at … of NEON samples and specimens per year. This NEON-focused webinar complements a  recent webinar co-hosted by the JGI …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new … Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, EMSL and the Protein Data Bank enables predictive ecosystem … with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has unique access to both expertise and infrastructure …
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