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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet technology in order to enhance the … internal analytical standards to accurately measure environmental microbiome activity levels.This functional assay …
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How To Use Our Systems
… One of the JGI’s key assets is our user community, comprising a broad range of researchers and trainees who use JGI resources and expertise. These collaborations have yielded numerous, high-quality outputs, such as … Looking for BBTools? Find it here.  …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis … to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those associated … The Microbial Program focuses on using advanced sequencing technologies to explore …
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Natural Prodcast Episode 19: Bill Fenical
… DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the … kept looking for open jobs that said, we want a chemist to study the ocean. And I didn’t find a single job … grants with people in other countries. And it became quite clear that this was an important field evolving, not …
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Natural Prodcast Episode 16: Marcy Balunas
… DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. … now?  MARCY: Sure. So my lab has really converged on the study of host-microbe chemistry. And the interactions– As … or thinking about something I can kind of see like the squid and the bacteria and how the chemistry is going back and …
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Prokaryote Program User Advisory Committee
… Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the microbial and metagenome programs and report back to them. The Committee …
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Natural Prodcast Episode 20: Brian Bachmann
… DAN UDWARY: Hey everyone and welcome back to a new session of Natural Prodcast. … hold me accountable and yell at me if I slip again. My JGI coworkers are way too nice to yell at me, so that’s gonna be … they said, OK, now, you have to go get the molecules. So I built a program there to do that. Yeah. JACKIE WINTER: Yeah, …
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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering Mass spectrometry … a table of standard product offerings, including a description of the product and deliverables as well as target cycle …
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Natural Prodcast Episode 11: Marnix Medema
… about natural products and the science and scientists of secondary metabolism. Hey there, and welcome back to Natural … the due date. Dan Udwary: Oh, no. Marnix Medema: It was quite uncertain whether that meeting was going to happen in … primer episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral … our understanding of the impacts of these viruses on microbiome processes is still limited. One key challenge …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies The Science The  Metagenome Stability Diagram — a tool within the Integrated … The work conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE … Metagenome Stability Diagram in IMG/M Data portal …
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