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… to sort of compare, conceptually, that data with genomics and the kind of things that I do with genome … And sometimes, in terms of biological activities– like antimicrobial or something– sometimes a little difference is … exciting. And why chemistry is so far behind in that stage is it’s still really difficult to do natural products …

… access JGI tools and systems. … Go to the “ edit contacts ” page in your account. Use the form to update all information … IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) …

… graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include …

I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … in an obvious way. NIGEL MOUNCEY: We did a little bit of metagenome screening work and did find related clusters. But … about what are they doing. And so it’s really functional genomics. And there’s a lot of sequencing based approaches, …

… and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With … systems can provide novel insights into the impact of microbial symbionts and their hosts on ecosystems.   …

… in 1985, which highlights our skewed understanding of microbial metabolism towards a minority of cultivated … genomes are critical to serve as phylogenetic anchors for metagenomes studies.  While uncovering the metabolic potential … focused on the application of  function-driven single-cell genomics . Here, single cells are characterized and selected …

… interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and … Proposal DOIs can be found at the top of the proposal info page on the JGI Genome Portal. You can navigate to the proposal info page using any of the below methods: Search the Genome …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …

… demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …

The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … Program plays a central role in advancing functional genomics, focusing on developing genetic systems that can … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …

… mentor students, teaching classes, and really setting the stage for what I really wanted to do and getting to– so I … as many as it did and how that became sort of a trend in genomics. So anyway, yeah, JGI has been working in secondary … are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called …

… to predict or just understand better the language of microbial cell-cell communication. And he told us about his … bound to it and maybe there will be some a affinity tag or a fluorescent tag, and so you can use that as a … acyl-homoserine lactone signal . mBio. 2023 Aug 31;14(4):e0101023. doi: 10.1128/mbio.01010-23. Publication: Cummings DA …