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Integrative genomics reveals paths to sex dimorphism in Salix purpurea L
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Natural Prodcast Episode 16: Marcy Balunas
… Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it going?  DAN: Good. How are you?  MARCY: Am fine. I live in a … Marcy. So I was wondering, how did you get interested in studying natural products?  MARCY: That is a great question … almost never Actinomycetes. And so when we look at their genomes we don’t get the same kind of information that we …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … just now switching from intermicrobial interactions, studying intermicrobial interactions by imaging interactions … looked at the grant applications for the last 40 years for studying biosynthetic pathways, all of them said that a …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global challenges by exploring plants’ role in capturing carbon, detoxifying soils, interacting with … supports the development of next-generation biofuels by studying perennial grasses and fast-growing trees as …
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Characterization of a large sex determination region in Salix purpurea L. (Salicaceae)
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Biodesign
…   The Joint Genome Institute's Biodesign Platform capabilities support researchers exploring how to convert sequence into functional assessments. … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and bioproduct …
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Natural Prodcast Episode 12: Nadine Ziemert
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s … ALISON TAKEMURA: So Nadine, what got you interested in studying natural products? NADINE ZIEMERT: Like almost … yes, sure, right. And yeah, so we worked on the Salinospora genomes. That was a really fun project. We had Brad on and …
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Natural Prodcast Episode 4: Nancy Keller
… tissue-specific in fungi. Some might go be produced in a sexual spore, some might be in an asexual spore, some might … this, is that I don’t have an awareness of how to go about studying them. Like to me, fungi are, you know, how do you … contigs. And so most fungi… Oh, the fungi vary in number of chromosomes. Like, ironically, yeast, which has a small …
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Representing sex chromosomes in genome assemblies
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Natural Prodcast Episode 14: Nigel Mouncey
… for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took a little break, but I’m hoping that from … And these were not in natural products, these were in studying regulatory mechanisms of, first, E. coli and then … build out much more of an integrative genomics approach to studying environments, studying organisms, to looking at …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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Secondary Metabolites Program
… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient acquisition and communication. Studying how these compounds are biosynthesized and their … algae and plants. These compounds are key to organisms' interactions with their environments and with each other, …
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