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… where he is the PI of the Laboratory for Biosynthetic Studies. Brian and I are old friends and colleagues, having … colors. I mean, where else in nature– and they’re not fungal. Where else nature can you go see colonies of … mechanistic enzymology to natural product biosynthesis to genomics to directed evolution– but it’s just the– it really …
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… is a curated database of actinobacteria for evolutionary studies, and hopefully we can catch him again some time to … Yeah, so any metabolite, produced by bacterial or fungal metabolism by microbes, will have a functional role. … I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff …
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… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …
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… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … natural products of microbial origin is around 30,000 from fungal, and a 40,000 from bacteria. Okay? And among the … 100,000 bacterial strains, and a hundred thousand fungal strains. And if you believe the prediction that each …
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… in bioinformatics, what, something that was born out of frustration in the sense that I was doing all these manual … of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And … are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …
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… Leveraging massive comparative genomics to decode millions of mystery genes and lay a … fungi remain largely mysterious. Only about 200,000 fungal species have been named. Among those sequenced, … machine learning's potential in fungal genomics. Studies cited in the review show that machine learning …
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… time, we found another molecule. This time it was from a fungal strain collected from sediments in the ocean. No, … we’re excited about the progress. The other drug, from the fungal strain– ALISON TAKEMURA: Oh Bill, maybe before you go … knowledge of the direction the field has taken: Chemical studies of marine bacteria: developing a new resource Bill …
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… The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic …
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… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … fungal metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI. Along with an improved … different soil communities for taxonomic diversity. These studies could pinpoint populations, but they said little …
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… those associated with microeukaryotes. The program also studies giant viruses. Key research areas include … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space: The JGI generates …
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… secondary metabolite pathways as viewed through metagenome studies, and what more JGI and others can do to enable …
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… critical to serve as phylogenetic anchors for metagenomes studies. While uncovering the metabolic potential of … focused on the application of function-driven single-cell genomics . Here, single cells are characterized and selected … Chris Rinke: Research Officer, Australian Centre for Ecogenomics Patrick Schwientek: Cofounder & CTO, Oralta …
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